Insertion junction: CLIP2.007900_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007900
Chromosome:chromosome 13
Location:4544207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS
lncRNA_TCONS_00191658 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCAGCGTTGTGGGCTGTTGCAGTGAACTGCCCGGCCCATTCGCCATG
Internal bar code:GGTAATGTCTCGAACAAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGGGAATATCGAGCGTT
Suggested primer 2:TTAACGCTAGCGCCAGGAAT