Insertion junction: CLIP2.007916_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007916
Chromosome:chromosome 2
Location:924599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079150 (1 of 1) PF03031//PF13671 - NLI interacting factor-like phosphatase (NIF) // AAA domain (AAA_33) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTACGTTCTGCGCTTTGGCTGGGCCACTGCAGCCCACCGCAGCAACA
Internal bar code:CGTGTCTCATGAAGGCTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3644
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCTGGTGTTCCTCACT
Suggested primer 2:ACAAGGAAAACGTTGCGCAA