Insertion junction: CLIP2.007938_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007938
Chromosome:chromosome 7
Location:5491600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351150 FA2 (1 of 1) PTHR24362//PTHR24362:SF229 - SERINE/THREONINE-PROTEIN KINASE NEK // SEVEN TRANSMEMBRANE DOMAIN-CONTAINING SERINE/THREONINE-PROTEIN KINASE 2; Flagella Abscission 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTGGCACCTTACAATGCTGTGCTGGATTTATGACTGTATTGCGACGA
Internal bar code:GTAATTCTAAACGTGACCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAAACGTGGTGGCAATG
Suggested primer 2:CAGACGCTCATAGGCCTGAG