Insertion junction: CLIP2.007942_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007942
Chromosome:chromosome 16
Location:859376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647800 (1 of 1) IPR000104//IPR001932//IPR015655 - Antifreeze protein, type I // PPM-type phosphatase domain // Protein phosphatase 2C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGCAAAAGAGCGAGGAGAGCGTGGCCTATGCATTGACAACAGGCGG
Internal bar code:TCATTGTTGGATGAGATCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTGTTGTTGTTGTTGT
Suggested primer 2:GCTGTGCGTGTACGTGTTTT