Insertion junction: CLIP2.007942_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007942
Chromosome:chromosome 16
Location:859379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647800 (1 of 1) IPR000104//IPR001932//IPR015655 - Antifreeze protein, type I // PPM-type phosphatase domain // Protein phosphatase 2C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTCGGTTTAGTATGGGCTGGTATCTACGACCCCCCTCCTCTCCCAC
Internal bar code:TCATTGTTGGATGAGATCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGCGTGTACGTGTTTT
Suggested primer 2:GCGGGTGTTGTTGTTGTTGT