Insertion junction: CLIP2.007943_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007943
Chromosome:chromosome 3
Location:3235823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165350 (1 of 3) 1.1.1.30 - 3-hydroxybutyrate dehydrogenase / D-beta-hydroxybutyrate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGTGGCTGCCCGCATAACAAGCCGGCCCCATCTGCACTGTGTACA
Internal bar code:TGTCAGGTTTCAGGGTTTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:777
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAGAAGGCCAACGTGG
Suggested primer 2:CCGCCTCATCATCACTCCTC