Insertion junction: CLIP2.007943_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007943
Chromosome:chromosome 3
Location:3235841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165350 (1 of 3) 1.1.1.30 - 3-hydroxybutyrate dehydrogenase / D-beta-hydroxybutyrate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCAGCCACCCACATGTGTCCGTCGCGCCGACCGTGCCCTGACCGTG
Internal bar code:TGTCAGGTTTCAGGGTTTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1985
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTCATCATCACTCCTC
Suggested primer 2:CAACAAGAAGGCCAACGTGG