Insertion junction: CLIP2.007962_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007962
Chromosome:chromosome 5
Location:1575681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234700 PYK3 Pyruvate kinase 3; (1 of 2) PTHR11817:SF3 - PYRUVATE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCAAGAGGCATGATAAATGTTGGAAGGAGGCCCGATGCAAGCAGAC
Internal bar code:GCTTTTCCGTTTCGAGTCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATCCTCGGTACACACG
Suggested primer 2:GGCGTGGTGTCCTCTGTAAA