Insertion junction: CLIP2.007967_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007967
Chromosome:chromosome 6
Location:8393133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307950 MRPL9,bL9m Mitochondrial ribosomal protein L9; (1 of 1) IPR000244//IPR009027//IPR020069//IPR020070 - Ribosomal protein L9 // Ribosomal protein L9/RNase H1, N-terminal // Ribosomal protein L9, C-terminal // Ribosomal protein L9, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCAGCTGCAGTACTGGCATGCCGTGTCGTCGAGAAGGCCAGGCTCG
Internal bar code:GGTTTGGCACGGGCGGGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGCCGTCCCCAATCTCT
Suggested primer 2:GCTCTACCCCACCTCCTGTA