Insertion junction: CLIP2.007983_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007983
Chromosome:chromosome 12
Location:5851545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533300 SRE2 Pre-mRNA splicing factor, SR-related; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGGCAGCTTGAACCCCGGTGGCCCTGAACCGGGTGCCTTGAAGCCG
Internal bar code:TGTACGGATTCTCCGGCAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCCAGACAGATACCACG
Suggested primer 2:CTATTCCCGAACGCCAAGCT