Insertion junction: CLIP2.007986_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007986
Chromosome:chromosome 12
Location:3927642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515400 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCGGCTGCGCTGGTGACGGTGGTTGGCAGCGGCACTGTGGCCAGCGG
Internal bar code:AAAGTCAGGGTTAAACGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3675
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCCTCTCACACAGGTAC
Suggested primer 2:GTGTTTGCTTCCCTGCCTTG