Insertion junction: CLIP2.007998_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007998
Chromosome:chromosome 1
Location:4155718
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g027750 MAE7,MFT7 MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTGCTATGCACTGCCCCATCGCCCCAGGCCGCTCAAGGCGCCACAT
Internal bar code:TTTATAGTTGCGGTATGTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGACCTTCAAACTCTGCT
Suggested primer 2:ACAATACCGAGTCCCGCATC