Insertion junction: CLIP2.008002_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008002
Chromosome:chromosome 3
Location:4182407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173350 ANK22b,ANK22 (1 of 1) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED; Predicted protein with ankyrin repeats intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGGCAATCGTATCCATCTAGAGCCACAATTACAAGTGCTTACGTTC
Internal bar code:GGATATGAGGACAGGGGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1360
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTTAAGCGAGGCCCTT
Suggested primer 2:ATGGACTTGCCCAGCTTCTC