Insertion junction: CLIP2.008011_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008011
Chromosome:chromosome 3
Location:7585112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204750 (1 of 1) PF12928 - tRNA-splicing endonuclease subunit sen54 N-term (tRNA_int_end_N2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCATCGCGGGGTCAGGCCGAATGGTCGCCCGTGGGGTTCCAGGCTT
Internal bar code:GGTCCTACGCTTGGTCGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1413
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGAGGAGGCCGTGTGAGT
Suggested primer 2:CGGTACTTACACCCACCCAC