Insertion junction: CLIP2.008011_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008011
Chromosome:chromosome 3
Location:7585115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204750 (1 of 1) PF12928 - tRNA-splicing endonuclease subunit sen54 N-term (tRNA_int_end_N2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTATGCGTCCATGCTCCGCACCCTGGGCGCGCTAAACAACGTTTACC
Internal bar code:GGTCCTACGCTTGGTCGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACTTACACCCACCCAC
Suggested primer 2:ATAGAGGAGGCCGTGTGAGT