Insertion junction: CLIP2.008016_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008016
Chromosome:chromosome 11
Location:3120668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475450 (1 of 1) K11863 - Ataxin-3 (ATXN3, MJD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAAGACCGGGCCCGTGCTCCTGTTCAAGTGCTGCATCCCCCGCCGCC
Internal bar code:TAAGTCAGAGTTTTTGTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2688
LEAP-Seq percent confirming:98.374
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCTTCGTGGTGAGGGAC
Suggested primer 2:CTGAATGCAAGCTCGATGGC