Insertion junction: CLIP2.008021_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008021
Chromosome:chromosome 7
Location:3614819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337000 CSD3 (1 of 2) 5.1.1.17 - Isopenicillin-N epimerase; Putative cysteine desulfurase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGAGTTGCAGCGGCCGGCGCTGGCGGTCGGAGCCATGCAGGTGTGT
Internal bar code:GAACCCAAAGTTTAGTGCCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACGCCCAACGGTCATCA
Suggested primer 2:TGTCGCATGTATCGCACTGT