Insertion junction: CLIP2.008024_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008024
Chromosome:chromosome 17
Location:3432419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723450 FAP13 WD-repeat Flagellar Associated Protein 13; (1 of 1) IPR001680//IPR007111//IPR017986//IPR020472//IPR027417 - WD40 repeat // NACHT nucleoside triphosphatase // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGCCAACACCTTCCGTGCATCCCATAACCTCATTCCATGTCACCAC
Internal bar code:GGTGGATGCTTCCTGGGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAAGGCAATTCGGATC
Suggested primer 2:CATCGTGAGGGAAGGGCATT