Insertion junction: CLIP2.008028_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008028
Chromosome:chromosome 2
Location:4330027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105050 (1 of 1) PTHR34810:SF1 - DNA-BINDING PROTEIN BIN4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTGAGCTTGGGCAGGCAAGACGCGAGGGGCCAGGCCCACGTGCGTCC
Internal bar code:GGTAGCTAGGGTTTGTCTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:749
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCGTAGCTCATGTCCTC
Suggested primer 2:CACAAAGTTCCAGTGCACCG