Insertion junction: CLIP2.008034_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008034
Chromosome:chromosome 16
Location:596397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGATGAACTCCTGCATCACCGTGCCCTTGCGGAAGATTCCCTGCATGC
Internal bar code:CGTATTGATTCCGACAGGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACCATAATGCTCTGTG
Suggested primer 2:GAACTCGTCCAGCAGGTTCA