Insertion junction: CLIP2.008040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008040
Chromosome:chromosome 16
Location:4857835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687301 SRH26 (1 of 1) K15192 - TATA-binding protein-associated factor [EC:3.6.4.-] (BTAF1, MOT1); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATATGTGCGTGTGTGCGTGCGTGCGTGTGTGTCAACGGCAGCGCGTGT
Internal bar code:TTTAACATCGTATTTCGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTATCTACAACCCCCGC
Suggested primer 2:ATGTGGCCTGATGGTCTTGG