Insertion junction: CLIP2.008040_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008040
Chromosome:chromosome 16
Location:4857848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687301 SRH26 (1 of 1) K15192 - TATA-binding protein-associated factor [EC:3.6.4.-] (BTAF1, MOT1); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACCGTCATACGCTTCTTCTCCGCATGCGCGTCCTCACCTGGCCCCC
Internal bar code:TTTAACATCGTATTTCGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2487
LEAP-Seq percent confirming:97.6471
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGCCTGATGGTCTTGG
Suggested primer 2:CTGGTATCTACAACCCCCGC