Insertion junction: CLIP2.008051_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008051
Chromosome:chromosome 16
Location:1077466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649466 CAX5 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTGGCAGTCTTTCCGTTCCTTAAACTTACTGCCTTGGCCTCAGCCC
Internal bar code:CCGGCCAAAGTTGTACGACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1283
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCAAACCTAGAGGCGGT
Suggested primer 2:GGAAAGCACGAAGGGAGGAA