Insertion junction: CLIP2.008059_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008059
Chromosome:chromosome 3
Location:8071278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201301 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGGCAATGTTTTGCTGCCTGCTTCTCAGATGTGTGCCTGGCTGCA
Internal bar code:TGCGTGTTTAATACTAGGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1465
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTGCGTCTAGGTCCTC
Suggested primer 2:AGGTTCACAAGGCCTCATGG