Insertion junction: CLIP2.008066_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008066
Chromosome:chromosome 2
Location:6263304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387250 CSR3 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAAGGTGCGCGAAGGAGTACGGCAGGAGCGGGGGCGGTGCGGGGCA
Internal bar code:CGTGCGGTCTAGTTTAGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1629
LEAP-Seq percent confirming:99.2308
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGCCTTTGCAAAGTTG
Suggested primer 2:GTGTAGGTCAACGAGCCCAA