Insertion junction: CLIP2.008074_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008074
Chromosome:chromosome 9
Location:5675105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410300 (1 of 1) PF00069//PF01593//PF07714//PF08766//PF13450 - Protein kinase domain (Pkinase) // Flavin containing amine oxidoreductase (Amino_oxidase) // Protein tyrosine kinase (Pkinase_Tyr) // DEK C terminal domain (DEK_C) // NAD(P)-binding Rossmann-like domain (NAD_binding_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGACTCCTGCACCTGCACCACCCCCACTACTGTTCCAGGCTACGC
Internal bar code:TCTTGTGTTTATGAATTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGACAAACATGCACGTGC
Suggested primer 2:GTCTTTGGAAGGGGATGGGG