Insertion junction: CLIP2.008099_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008099
Chromosome:chromosome 7
Location:4581521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344150 (1 of 1) PTHR21314//PTHR21314:SF0 - UNCHARACTERIZED // UPF0553 PROTEIN C9ORF64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGCAACCCCCACACCTTTTACCCACACGCCAAACACACCGCACGCC
Internal bar code:TCTCGCCTCTTGGCTTATGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTGTGTGTGTGTGTGC
Suggested primer 2:CTGTCCGTCTTCTGTCCGTC