Insertion junction: CLIP2.008101_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008101
Chromosome:chromosome 13
Location:1930430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576100 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCACATCAGCAGTCACCACCTCATAGGTTAGCCTTGGGGCCGCCAA
Internal bar code:GACTACTTATCGTGCTGACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3520
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCAGTACCAGCAGCAT
Suggested primer 2:CACACGTACAAGCACACACG