Insertion junction: CLIP2.008102_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008102
Chromosome:chromosome 8
Location:1092940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362500 (1 of 1) IPR016024//IPR027165 - Armadillo-type fold // Condensin complex subunit 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTTGGAATCAGCCCAGGTTGAGCTGCTGCCGGCAATGCTGCTGGAGG
Internal bar code:TAAAGTTAGGTTGGGCGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGACATAGACGAGGATGC
Suggested primer 2:GCAGTGCTGGTAGACTTGGT