Insertion junction: CLIP2.008108_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008108
Chromosome:chromosome 6
Location:5521693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286650 DMT4,DMC4 (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCTAAAGGTCCATTCCACCAAAGCACAAAGCCATCCCCTTCCTATC
Internal bar code:TGGTTGAGGGACTGATGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACACACACACACCAGG
Suggested primer 2:ATGCCGTACACCACACACAT