Insertion junction: CLIP2.008113_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008113
Chromosome:chromosome 9
Location:149476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386731 (1 of 2) K13095 - splicing factor 1 (SF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCGCTTCATGGCGGAGATGCAGCGGGGCCAGTTCTCATGAGAGCGCC
Internal bar code:TTTTTTTAACGCAGTATAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3485
LEAP-Seq percent confirming:73.4375
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCGTTCACAAGGCGTTA
Suggested primer 2:TTGCGCGGGTATGAACAATG