Insertion junction: CLIP2.008119_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008119
Chromosome:chromosome 1
Location:6533563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046237 GEX33 (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATTGCCGGCCCTCACACCTATGCACATGTTCTGACCAATACCGGCTC
Internal bar code:AGCGCGCCTATCGGCGTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:95
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGTGCGTGTGTTTGCA
Suggested primer 2:GCCATCCATCCACTGCTCTT