Insertion junction: CLIP2.008123_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008123
Chromosome:chromosome 2
Location:2409933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091200 (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGCCTGATGATGCCCTGGGCAGGGAATGGCCGGAAGGCGTCAAGC
Internal bar code:CAGACGACACGCAGGCCAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATCTCAAGTGCAGGTGT
Suggested primer 2:TAGCGAGGTAGACAGCAGGT