Insertion junction: CLIP2.008123_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008123
Chromosome:chromosome 2
Location:2410138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091200 (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACAAGCTGGAGGGCCACCTCTTCACCGCCCACCAGACCTTTTCCCC
Internal bar code:CAGACGACACGCAGGCCAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:801
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGAGGTAGACAGCAGGT
Suggested primer 2:CCGATCTCAAGTGCAGGTGT