Insertion junction: CLIP2.008127_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008127
Chromosome:chromosome 12
Location:6428364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110060

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTGGCAGCCTCGGCCTTTCTTGGCTCCCCTATCTGGCACAGCTTAG
Internal bar code:ACTGTCGAATATTCTATCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2388
LEAP-Seq percent confirming:92.9577
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGGCTGCCTGTAACAG
Suggested primer 2:AGTGCTCCCAGCCACAATAC