Insertion junction: CLIP2.008129_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008129
Chromosome:chromosome 6
Location:3814000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278176 (1 of 1) PTHR22847//PTHR22847:SF500 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCATGTGCAGCAGTGGTAGGGTGCTCACCCGTACGGAGGAGTCGAAG
Internal bar code:GTCGTCGGTACACGTATAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1120
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCTGCCAACACATTTT
Suggested primer 2:ATCATGCCGCTGTCATTGGA