Insertion junction: CLIP2.008133_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008133
Chromosome:chromosome 6
Location:5701902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288100 (1 of 1) PTHR12829//PTHR12829:SF1 - N6-ADENOSINE-METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCACCAACCTCAAGTGCCACGTGTTGTGCCCAGAGACTCTTGAGACC
Internal bar code:CAGAGCATGTAATGAACTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGCTTAGCGGTTTGGT
Suggested primer 2:ACCGAGAGAACTTACCGGGA