Insertion junction: CLIP2.008136_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008136
Chromosome:chromosome 13
Location:2366200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579100 APC1 (1 of 1) K03348 - anaphase-promoting complex subunit 1 (APC1); Anaphase promoting complex subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTATCTCACGACGCTCATCCATTCGGCTCATGGCAGGCTGCTGTCG
Internal bar code:TCAATGCCATTGGTCTTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAGGCCTCAAGCATGA
Suggested primer 2:GGAGCTTAAACTGGACGTGC