Insertion junction: CLIP2.008138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008138
Chromosome:chromosome 12
Location:4057471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516450 CAG1 Gamma carbonic anhydrase 1; (1 of 1) PTHR13061//PTHR13061:SF7 - DYNACTIN SUBUNIT P25 // SUBFAMILY NOT NAMED CDS
Cre12.g516500 CUL4,CUL2 (1 of 1) K10609 - cullin 4 (CUL4); Ubiquitin ligase SCF complex subunit Cullin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTTGTACTGAGGCAAGAACCAGGGCCAGAAGGCCCGCGTGTTTGCCT
Internal bar code:ACGGGCCGCTGTTCCTTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCGAAACGTTGTCACC
Suggested primer 2:CGAACTTCCCACCGTGTACA