Insertion junction: CLIP2.008142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008142
Chromosome:chromosome 3
Location:1344692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGCGTGTGGACACTAATCCCCCCTCGAGGTTAGAGTAGCGGGGGTT
Internal bar code:TGAGTAAATTGAAAAAGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3985
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCATTATGCCGTGCAG
Suggested primer 2:TCATATGACCGGGTGTCCCT