Insertion junction: CLIP2.008143_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008143
Chromosome:chromosome 3
Location:775757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146127 FAP96 (1 of 1) PTHR31144:SF1 - UPF0602 PROTEIN C4ORF47; Flagellar Associated Protein 96 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGCAGCACACACTAAGTCCGCACCCTCCCCACCCTGTTCCTCGGAAC
Internal bar code:ATTTTGCTCCTTCAGGGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAACTCCTGCTTCCACG
Suggested primer 2:GTCGCTCTGGACAGATAGGC