Insertion junction: CLIP2.008143_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008143
Chromosome:chromosome 3
Location:775769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146127 FAP96 (1 of 1) PTHR31144:SF1 - UPF0602 PROTEIN C4ORF47; Flagellar Associated Protein 96 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTGCCTTTCTCACCCGCAGGCAGTTTGCAGCCCATCATGAACCCAA
Internal bar code:TGTTGAAGTACGTCATCCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5487
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCTCTGGACAGATAGGC
Suggested primer 2:ATCCAACTCCTGCTTCCACG