Insertion junction: CLIP2.008162_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008162
Chromosome:chromosome 6
Location:5926161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289900 HEN2 (1 of 24) PTHR10641 - MYB-LIKE DNA-BINDING PROTEIN MYB; Hua Enhancer 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTGGAGATGAGTCCGCGAGCGAGGGCGAGGGCGAAGAAGGCGACAC
Internal bar code:GACTTATAGGTCTTCGGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACAACGGCTCCAATTGC
Suggested primer 2:TGCTGTGCGAAATGTTTGGG