Insertion junction: CLIP2.008166_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008166
Chromosome:chromosome 1
Location:512898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003050 SEC8 (1 of 1) PTHR14146:SF0 - EXOCYST COMPLEX COMPONENT 4; Component of the Exocyst Complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACACGCAGGCGCACGTGCGCAGGTGGATGGTGTTGGGGACGCCAAGA
Internal bar code:ACGGTAAGCCGAGCGTATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:723
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAAAAGAAAGGGGCCGG
Suggested primer 2:CTGCAACACTTGTCACTGCC