Insertion junction: CLIP2.008176_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008176
Chromosome:chromosome 7
Location:468032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315500 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCGGGCAAGGCCGCGCTGTTGGACTGGGTGACGGGCATGACCTCGC
Internal bar code:TCTTTATCAGCAATGTGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:807
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCGGGGAAACTGATGT
Suggested primer 2:TCACATGAGGGAGCAAGCAG