Insertion junction: CLIP2.008179_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008179
Chromosome:chromosome 17
Location:5332284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738000 AGG2 Aggregation 2; (1 of 6) PTHR15907:SF21 - DUF614 FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGCGACGTTACGACCGTACGACGACGACTACACTTCGTTTAATGCA
Internal bar code:TCTGTGGGCCATAATACCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2657
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCATTGCCGGATTGTAG
Suggested primer 2:AGAAAGCACGACTGACCTGG