Insertion junction: CLIP2.008180_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008180
Chromosome:chromosome 9
Location:4538877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401108 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACACTGGCGTACACCGCGGGCGTGCAGCCCTCGTGATCCCGCCGGCT
Internal bar code:TGCGCATATTCTATAGTTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1848
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCAGATCCAGGAGCAGC
Suggested primer 2:GGGTTGTGTGTGTGTGTGTG