Insertion junction: CLIP2.008186_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008186
Chromosome:chromosome 13
Location:4878906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTCAGAAGTGTGCGCCAGCGAAGCGCATGGGCAATGGAAGCTTAGT
Internal bar code:CGCTTACAGTTTAGTAGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1916
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAAGCGGTGCGTGAGTCT
Suggested primer 2:AGCCGTACTCATCATCGCTG