Insertion junction: CLIP2.008187_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008187
Chromosome:chromosome 2
Location:3255811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097227 Found in Chlamydomonas and Volvox but not strongly conserved elsewhere CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGCTGGTGGAGGCGCAGCGCATGAGCGACCCGCTGTGCCTCATGGT
Internal bar code:CTCGAGTTTATGGGTTTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGATGGGATGGGTGTGTA
Suggested primer 2:AAGAAACCGTCGCTCAGAGG