Insertion junction: CLIP2.008191_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008191
Chromosome:chromosome 11
Location:1445573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469500 FXL6 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCACATTGCGGTGGCGGTGACAGACAAAGATATATGTGGGACGGAAG
Internal bar code:CACTCATGACATGTCTGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGGGTAGCCGTCCATGA
Suggested primer 2:ATAACTACATCCCGGCTGCG